YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|152977189, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYTDLLLKL GLSAVLGFAI GLERELKRKP LGLKTCLVIS IISCLLTIVS IKAAYNLPHT  60
   61 NHLNMDPLRL AAQIVSGIGF LGAGVILRRG NDSIAGLTTA AMIWGASGIG IAVGAGFYIE 120
  121 AVFGMFFLMI SVELIPLTMQ FLGPRSLRQR DIAVKLVVRN MNNISTVIEE IKAMDIKVKN 180
  181 MKLKTLENSS HLLHLKLSVD QKTHTTDVYY TLQHLDSVQQ TEVESI

Type	Start	End	Confidence
Cytoplasmic	1	30	0.65
Transmembrane Helix	31	54	0.87
Non-Cytoplasmic	55	68	0.88
Transmembrane Helix	69	87	0.96
Cytoplasmic	88	94	0.83
Transmembrane Helix	95	116	0.90
Non-Cytoplasmic	117	122	0.66
Transmembrane Helix	123	143	0.90
Cytoplasmic	144	226	0.96