YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89084320, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRMEPILVI TILGGLILLL LFIGAPFKPL KFLGQGVIKI LIGALFLFFL NAFGGQFGLY  60
   61 VPINLATTAV SGFLGLPGVF ALAAIQTWIL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.57
Transmembrane Helix	7	27	0.94
Non-Cytoplasmic	28	35	0.46
Transmembrane Helix	36	59	0.84
Cytoplasmic	60	64	0.41
Transmembrane Helix	65	89	0.84
Non-Cytoplasmic	90	90	0.58