YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89084379, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSSLIGVI LAIIGVGVGM VLKGVHPSAL VNPAAILIII VGTIAAVTIA FPMNELKKVP  60
   61 KLFGILFKER KQMVPAELIR MFSEWAQLAR KEGLLALEAK TNEIEDPFLK NGLSLAVDGQ 120
  121 SADYIRDVLS EEIESMEERH LSGAAIFTQA GTYAPTLGVL GAVVGLIAAL GDMTNTDALG 180
  181 HAISAAFVAT LLGIFTGYVL WHPFANKLKR KSKQESKLKY MMIEGVLSIL EGEAPRVIEQ 240
  241 KLASYLPSGE RKQFLEESEV KANE

Type	Start	End	Confidence
Cytoplasmic	1	6	0.87
Transmembrane Helix	7	26	0.94
Non-Cytoplasmic	27	33	0.75
Transmembrane Helix	34	53	0.95
Cytoplasmic	54	148	0.97
Transmembrane Helix	149	170	0.92
Non-Cytoplasmic	171	178	0.86
Transmembrane Helix	179	202	0.91
Cytoplasmic	203	264	0.98