YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89084378, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRKKKEHH EEHVDESWLI PYADILTLLL ALFIVLFAMS SVDARKFEAL SKAFNDAFNG  60
   61 GTGFFDFPSP MPDGAMQSAD KADTENKDEV EKASAAGTLE EGQNDMEAEG KIQKLTDKQE 120
  121 LKEVEEKVKT YIQNNGLTDK LETSLTDEGL LVTIRDNVFF ASGSAEVRSG ELTIADEIGE 180
  181 LLVMDPPRNI IISGHTDNMP IKNSEFESNW ELSVMRAVNF MKILLHNKDL DARAFSAKGF 240
  241 GEFQPAASND TKEGRDKNRR VEILILPRT

Type	Start	End	Confidence
Cytoplasmic	1	17	0.84
Transmembrane Helix	18	40	0.87
Non-Cytoplasmic	41	269	0.89