YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89086259, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDQSSKITV AGAGSWGTAL AMVLADNGRQ VRLWGHNPVQ IKEINEQHTN QKYLPDIKLP  60
   61 SGIQGFSSLE EALDGVDTLI LAVPTKAIRE VAGKINEFQR VPLTIVHVSK GIEPDTLLRI 120
  121 SEMIEEEITS EALGSVVVLS GPSHAEEVSL RHPTTVTVSS KNIEAAEHVQ DLFINHNFRV 180
  181 YTNPDIIGVE IGGALKNIIA LAAGITDGLG YGDNAKAALI TRGLAEIARL GTKMGASPLT 240
  241 FSGLTGIGDL IVTCTSVHSR NWRAGNLLGK GHSLQEVLDN MGMVVEGVRT TKAAYQLAEK 300
  301 YNVKMPITEA LYEVLFNGAD PKESVDKLMA RGKTHEMEDL ANVLEDRIDK

Type	Start	End	Confidence
Signal Peptide	1	25	0.90
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	350	0.99