YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89099115, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKLLVIKL ALLIPLFAAA LPLLGPSEKA DAFSAQVIQH GAVGDDVIEL QSRLQYLGFY  60
   61 NGKIDGVFGW GTYWALRNFQ YEFGLPIDGL AGQETKAKLA KASKYNEQFV KEQVNKGNKF 120
  121 THYGGVDLDK QKKPSGGAGQ GGGGGGGQSA PAKPEAKQPS AANIPSGFSQ NDIQLMANAV 180
  181 YGEARGEPYT GQVAVAAVIL NRVQSATFPN TVSGVIFEPR AFTAVADGQI WLTPNETAKE 240
  241 AVMDAMNGWD PTGEALYYFN PDTATSGWIW TRPQIKKIGK HIFCE

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	285	0.99