YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89098768, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMEENIQPL DPIAFSLGPI QVHWYGLIIG TGIALALWLA MREGEKRGLQ KELFADLMLW  60
   61 AIPIAILSAR LYYVIFEWDY YAQNPAEIIK IWHGGIAIHG ALIGSVITAY VFAKKKGISF 120
  121 WQLADITAPS IILGQAIGRW GNFMNQEAHG REVTRSFLEN LHLPEFIINQ MYINGTYYHP 180
  181 TFLYESLWNI AGFIILLSLR RVNLRRGELF LTYVIWYSIG RFFVEGMRTD SLMLTESLRM 240
  241 AQFISIVLVI GAIVLIVIRR TKGYADKRYL DKSA

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.97
Transmembrane Helix	21	41	0.95
Cytoplasmic	42	52	0.96
Transmembrane Helix	53	74	0.90
Non-Cytoplasmic	75	90	0.89
Transmembrane Helix	91	112	0.93
Cytoplasmic	113	119	0.82
Transmembrane Helix	120	138	0.92
Non-Cytoplasmic	139	180	0.89
Transmembrane Helix	181	199	0.91
Cytoplasmic	200	208	0.81
Transmembrane Helix	209	227	0.88
Non-Cytoplasmic	228	239	0.82
Transmembrane Helix	240	258	0.97
Cytoplasmic	259	274	0.93