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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89095980, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEQAKETQF EISGMTCSAC AVRIEKGLKK VEGVENASVN LALEKAAVQF NPEKVKQEDI  60
   61 FEKVENLGYK VVTEKAELAI TGMTCAACSA RIEKGLKKMD GISDANVNLA LERADVVYNP 120
  121 SAVSPADLIK RVEKLGYGAA LRTEEVAGEE QDHREREIER QKGKFTFALI LSLPLLWAMA 180
  181 GHFSFTSFLY VPEMFMNPWV QLALAAPVQF IIGRQFYTGA YKALRNGSAN MDVLVALGTS 240
  241 AAFFYSLYLS IRSIGSGGHS VNLYFETSAV LITLIILGKL FEAKAKGRSS EAIKKLMNLQ 300
  301 AKTARVIRNG EETEIPLESV MPGDILAVKP GEKIPADGMI LEGRTAVDES MITGESVPAD 360
  361 KEPGDSVIGA TINKNGFIKV QAAKVGKDTA LAQIIKVVED AQGSKAPIQR LADKISGIFV 420
  421 PIVVGIAAVV FLIWYLWADP GNFAEALEKL IAVLVIACPC ALGLATPTSI MAGSGRAAEY 480
  481 GILFKGGEHL ERTHRITTVV LDKTGTITNG KPVLTDVLTE MDETEFLAMA GAAEKQSEHP 540
  541 LAEAITAGIK ARNIIMKEAE EFEAIPGYGI KAVVAGKKLL IGTRRLLGAD SIDFSPAEAD 600
  601 LETLESQGKT AMLAAIDGHF AGIIAVADTI KDTSAEAIAR LKEMGLEVIM MTGDNKATAE 660
  661 AIGREAGVDA VISEVLPEGK AEEVKKLQKQ GKIVAMVGDG INDAPALAVA DIGMAIGTGT 720
  721 DVAMEAADIT LIRGDLRSIS DAIYMSRKTI SNIRQNLFWA FGYNTLGIPF AALGLLAPWL 780
  781 AGAAMAFSSV SVVLNALRLQ RVKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle