YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89073147, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSLVALSV LAATALPSLA NAADYSDDIH KNDYKWMQFN LMYAYKELPR SNDAHTGHDY  60
   61 LEMEFGGRSG IFDLYGYVDV FNLTNSDSQD KSGSKDKMFM KFAPRISLDA LTGKDLSFGP 120
  121 VQEVYVATLM NWGGDNGGVN NYFVGLGSDV NVPWLGKVGF NVYSLYDMNA KDWNGYQVST 180
  181 NWFKPFYTFE NGSFLSYQGY IDYQFGMKKK VAGLNTSNGG AMFNGLYWHS ERFAVGYGLK 240
  241 AYKDVYGLKD GGIAGKTSGV AQYVSLSYKF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.99