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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89073010, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSRRSFLK GLATTSAASV IGPSLLASSK VFADDQIGQG TWRYSGSHWG AFRAHIYAGK  60
   61 VQEIEAIEID KNPTEMLKGI KGVIYNPSRV RYPMVRLDWL KKHKFSGETR GNNRFIRVTW 120
  121 DEALDLFYRE LERVQKDYGP WALHAGQTGW RQTGQFHSCT SHMQRAVGMH GNYITKVGDY 180
  181 STGAGQTIMP YVLGSTEVYA QGTSWSEILD HSKNVVLWAN DPVKNLQVGW NCETHESFPY 240
  241 LAKLKEKVDN GEINVISVDP VKNKTQRYLN NKHLYINPQT DVAFMLGVAH TLYNENLYDK 300
  301 EFIKMYCLGF DEFIGYVKGE TKDKIEKTPE WAAEICGVPT DQIKDFARML VKERTQILFG 360
  361 WCIQRQEHGE QPYWMGAVIA AMVGQIGLPG GGISYGHHYS GIGVPSTGFA APGGFPRNVD 420
  421 EGQKPKWDNN DFNGYSRTIP VARFVDCILE PGKEIKYNGS KVILPDYKMM VISGNNPWHH 480
  481 HQDRNRMKKA FQKLQTVVTI DFAWTATCRF SDIVLPACTQ FERNDIDVMG SYSGRGLLAM 540
  541 HKLVDPLYQS KTDFEIFTEL TRRFGKNNEY TRGMDEMQWV SMLYNDCRKA NKGKFDMPEF 600
  601 DVFWKQGFLD FGTGQPWVRH ADFRQDPEIN ALGTPSGFIE ITSRKIGRYK YEHCQEHPMW 660
  661 FEKTERSHGG PGSDKHPFWL QSCHPDKRLH SQMCESEEFR ATYTVQGREP VYINPQDAAE 720
  721 KGVKDGDVVR VFNDRGQLLA GAVLTDSYPR GVVRIEEGAW YGPLNEKIGA IDTYGDPNTL 780
  781 TIDIPSSELA QATSAQTCIV NFEKFKGELP PVTSFGGPIE VS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle