YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89072996, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWYLAVLKK YAQFNGRSRR KEFWFFTLFS ALISMALGFA DSVLGLPSIG DGYGVLAALY  60
   61 SLFIVIPNIA VIVRRLHDQD RTGWWALIMF VPIVGILVLL YFMVQDSKPG DNRFGPNPKH 120
  121 NEGSFTV

Type	Start	End	Confidence
Cytoplasmic	1	22	0.97
Transmembrane Helix	23	44	0.92
Non-Cytoplasmic	45	52	0.80
Transmembrane Helix	53	73	0.93
Cytoplasmic	74	82	0.87
Transmembrane Helix	83	104	0.95
Non-Cytoplasmic	105	127	0.99