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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89095946, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGFIFTLAL LEEEALAKKL LDAPHIKQLP ELPRGCEVTS LAMMLLDAGA KADKMTLAKQ  60
   61 IKKVPFKQNG LHGNPYDGFV GNMYTYSLPG YGVYNGPIAE LAEDYLPGRT VNLTGLAPSY 120
  121 IYKMIDKGST VWVITNSRFR ALPTSQFQTW NTSTGKVSIT YREHSVLVTG YDSQYVYIND 180
  181 PLYKTKNRAV SRKNFEASWV QMGRQAISYY PKNQHFFADT IGHWAEKEIN RFSELEYING 240
  241 YKNGLFKPND SITRSQQAIM TARVLNLPLE NRKSPLFKDL SVTNTEYKAV SALVEEGILQ 300
  301 DGAAFSGTNA LTRAEMSKIL TMAFKLPLSG TKQFTDVSDA SWALPYIQTI YEYGITSGYS 360
  361 NGTFKPNDQV TRAQFSVFLT RAMEKLWFTD IYKHWARDDI SMLKREGIIK GESNGSFRPN 420
  421 ASISRAEAAV MLDRSIDLPE AGGFQAAFKD LPANHFSYSS VMKLVQAGIL SDSEAFRPND 480
  481 EMSRQEFARV IALGYKLNYT PADPVFTDVP PDHGFYEAIQ ALAQNNITKG NGSGQFSPGS 540
  541 SITRAEFASL LARAYRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle