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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89089453, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETHLNNKF MKKVSLFLIF VLSLNILLPS SVSLAETKKT ETFDNLGLTG SSYVDGSFVG  60
   61 VDGITWTYTG ARNQDTYGID GTGIMFRDPG KAVESSSISG GISSISIDLK KAFTSTADRQ 120
  121 VEVFINGQSI GKSEAFSDDA VHTFTVNNLN VAGPFTIKVA NAATKQVVVD NISWTSNEAG 180
  181 ATKTAGVEAS VAPGAVAAGT EVALTSATAD STIYYTTDGS APTTSSSTYT DPITINENTT 240
  241 IKAFASASEL EDSEIASFEY TILSAKSIAE VRAMQQGTNV MTTGIVTAVL GSATYIQDET 300
  301 AGIVLYGANL GVNPGDRVQA SGELTEYSSL LEINVKPSDV KVLSKEEVPA AAEVKAADFN 360
  361 EDIESTLVTL TDVSVGSFSG GNYTATDADG VTFQIRPSDS SLLAVNTTYD SITGVLSAYN 420
  421 NAFQLIPRNA GDIILDSSKV QAVVANPASG LVNEGDAVTL TTGTEGAAIY YTTDGSNPDE 480
  481 NSTVYSGPIT ISEATTIKAV AVKSGMTDSD VAVFNYAIQK EEIRIHDIQG EGHYSLYQDS 540
  541 NVNNIEGIVT KVVDSRNFYM QDPQPDDNDK TAEGILVYRS NHGLTVGNKV KVSGTVKEYV 600
  601 LDGYAEKAQT DLPVTEISAS AIEVTEAEAE LPAPVILGVD RQIPTEIIDN DGFAEFDPEE 660
  661 DGIDFWESLE GMLVEVNSPK VVAPQKYGEL VVVPGSYETN TDNGGLRITE EDMNPERVTL 720
  721 LIDDESFVAK MGDHFNGSVQ GVVSYGFSNY KVLTDKTDLP EFVEADIERE TTSLTKEEDK 780
  781 LTIASYNVEN FSPAVSADKI ERLARAVVEN LKRPDIIGLT EVQDNNGETN DGTTDATESF 840
  841 NVLAAKIKEL GGPQYSYTDI APVNNQDGGA PGGNIRVGFL YNAERVSLTE GAPKGTSTQS 900
  901 VGFENGKLTL NPGRIDPTNE AYKSSRKPLA AQFEFKGESV IVVANHFNSK GGDQPLFGKV 960
  961 QPPVLGSEVQ RMKIANIVNG FVKDVKAEDP NANIVLLGDF NDFEFSNPLK ALKGQELTNM1020
 1021 IEQVPAEERY SYSYQGNAQV LDHILVSNNL AAATAVDIVH INSGFMEEHG RASDHDPVLI1080
 1081 QTALQPKAEP VYDKVYNLSG FSTKKLTVSA HNSLVNMDAS SVIREGIVLK TSVTLKGAGL1140
 1141 KTTKVIISPA QSGAIIDLSG AEVQEVVIDN SNVKDIRGAE NVQKWTVTDG VDTSNIKFTN1200
 1201 VKGEAIASPF HPVENGAPAA SAISNQTVQV NKSLTIDLSN YFTDPDGDEL TYTSTRGNVF1260
 1261 GSTLTFLESE EGTYQVTVKA TDGDKEAQLT FQLTVTGEQT EQPVDSYYTA AAGKTGSELK1320
 1321 AALHDIIKTH KVLSYSQVWD ALKETDEDPN NPNNVILLYS GLSRSKDRNG GNVGDWNREH1380
 1381 VWAKSHGDFG TTNGPGTDIH HLRPTDVQVN STRGNLDFAN GGSAVTNCSD CKRSANSFEP1440
 1441 PDRVKGDVAR MLFYMAVRYE NGDRVDLELN DLLNNGSNPY HGKLSVLLEW NEQDPVDAFE1500
 1501 MNRNNVIYSI QENRNPFIDH PEWANQIFRT AN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle