YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89080895, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKMSIWSL VANASVVVQL VMLMLLMASV ISWVMIFQRQ AVLSSARKSL RNFEDRFWSG  60
   61 VDLGQLFREI NHEPNSDCGA ENIFRAGIKE YTRLTQQPGY DPDSVMDGIQ RSMRVALARE 120
  121 EDKLERHLPF LATVGSTSPY IGLFGTVWGI MNSFRGLANV HQATLASVAP GISEALIATA 180
  181 IGLFAAIPAV IAYNRYSAQV EYLLGNYETF ADEFSSILHR RMHASH

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.85
Transmembrane Helix	16	37	0.93
Cytoplasmic	38	127	0.93
Transmembrane Helix	128	150	0.88
Non-Cytoplasmic	151	170	0.80
Transmembrane Helix	171	193	0.84
Cytoplasmic	194	226	0.91