YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89094147, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFFIELVVS ALLLMGGIFV LLGSIGLLKM PDFYMRLHTP TKATTLGMGA ILVACMLLTS  60
   61 YRSGGVSAHE LLITIFLFIT APVSAMMLAK TALHLKVKIK KGSRNRDLAE TAKHREPPSH 120
  121 AE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.92
Transmembrane Helix	7	28	0.93
Cytoplasmic	29	42	0.82
Transmembrane Helix	43	61	0.94
Non-Cytoplasmic	62	70	0.73
Transmembrane Helix	71	94	0.89
Cytoplasmic	95	122	0.98