YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|105300280
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFSRCHFKSR NDSVIHILVE VTTAQGAIHS YLGSPFWIRQ AVLLPTPSLH WREISSGRLE  60
   61 LEWQHPSPWA AQETCYQLRY TGEGHEDWKV LEPSLGAQGG TLELRPRARY SLQLRARLNG 120
  121 PTYQGPWSAW SPPARVSTGS ETAWIHLVTA LLLVLSLSAL LGLLLLKWQF PAHYRRLRHA 180
  181 LWPSLPDLHR VLGQYLRDTA ALSPSKATVT DSCEEVEPSL LEILPKSPER TPLPLCPSQP 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	13	0.63
Transmembrane Helix	14	33	0.44
Non-Cytoplasmic	34	142	0.80
Transmembrane Helix	143	166	0.92
Cytoplasmic	167	240	0.85