YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89075089, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV LATLVTGIIW ALDKFLWAPK RQLKIAAATE QSGGQVDAKT LETVAPQPAW  60
   61 IESASSMFPV IALIMVFRSF IYEPFQIPSE SMLPTLYVGD FILVEKFAYG LRDPVFHDKI 120
  121 VSTGEPKRGD VVVFKFPPQP KIDYIKRVVG LPGDTVRYSE DKQLCIQPKG TSVCKPVKLT 180
  181 DMTDSDFKQG MARLVEFKEQ LGDVEHHILN NPLRRDRRMA YEPRPGIGEW VVPEGNYFVM 240
  241 GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFDRQADS LLPSWIPTGV RFNRIGSIK

Type	Start	End	Confidence
Signal Peptide	1	21	0.81
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	299	0.93