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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89049720, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSEIKRLY RIIQVQLRYG LDDFIPADPR TELPKKLRKS LFWIKNEYPD VPLGERLRLA  60
   61 LQELGPVWIK FGQMMSTRRD LFPPHIADQL ALLQDQVEPF DGKLAKRTIE ESLGGTLEQW 120
  121 FDDFDEVALA SASIAQVHTA TLKENGKEIV FKVIRPDIKP IIEADIKLMY RMAEIVSRLQ 180
  181 PEARRLRPVE VVREYEKTLL DELDLMREAA NSIQLRRNFD GDDTLYVPEV YTDYSSVNLL 240
  241 VMERIYGIQV SNIEGLKANG TNLKLLSENA VNIFFTQVFR DSFFHADMHP GNIFVSYEHP 300
  301 ENPQWIALDC GIVGTLNRED KRYLAENLLA FFNRDYRKVA ELHVDSGWVP HDTNVDEFEF 360
  361 AIRTVCEPIF EKPLCEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP 420
  421 QLDLWATAKP FLENWMSHQV GPQGILDAIK SKAPFWAEKL PELPELLYDS LRQGKVMNQR 480
  481 IDKLYDNFME NRRTHNQARF YFGIGATFMV CAAILFGDQV ATYPAVSAGV GTLFWLLGWR 540
  541 TCRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle