YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109691674
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWIFLISFY KGVKMRELIE GYLGKSIEGK KSKMPAKLDF IQSASGLFLG LFMWVHMLFV  60
   61 STILVSEDFF NSVVHFLELK FVYDNPVMSY LTSFLAACVL VVFFVHALLA MRKFPINYRQ 120
  121 YQILRTHSKK MNHSDTSLWW VQAFTGFIMF FLGSAHLIFI VTNADKISGD MSGDRVVSHF 180
  181 MWLFYAVLLV CVELHGSIGL YRLCVKWGWF EGKNVKESRK KLKTAKWIIS IFFLVLGVLS 240
  241 LAAFIKIGYE NYQNQTQATA MIKNYNGANY EYTI

Type	Start	End	Confidence
Cytoplasmic	1	39	0.99
Transmembrane Helix	40	65	0.82
Non-Cytoplasmic	66	88	0.93
Transmembrane Helix	89	110	0.92
Cytoplasmic	111	137	0.95
Transmembrane Helix	138	160	0.95
Non-Cytoplasmic	161	180	0.94
Transmembrane Helix	181	204	0.92
Cytoplasmic	205	224	0.95
Transmembrane Helix	225	245	0.95
Non-Cytoplasmic	246	274	0.94