YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AROQ_CAMJD
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIMIIQGPN VNMLGVREVG IYGAMKMEEI HEQMKLAASQ NNVELDFFQS NFEGEIVDKI  60
   61 QECLGTVDGI IINAAGYTHT SVAIRDAIAA VALPTIEVHI SNVYRREEFR QKNLIAPVCS 120
  121 GTIVGFGPFG YHLALMGIIQ ICEQIKNLRA MQQAQQTNK

Type	Start	End	Confidence
Cytoplasmic	1	113	0.74
Transmembrane Helix	114	135	0.76
Non-Cytoplasmic	136	159	0.90