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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112803926, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGIKSLFFS MTSAIVLMII FAVASGAATI IESKTSTELA WVYVYGAGWF ALVQVLLGIN  60
   61 LAYNIFHYRL LNIKKLPSLL FHLGFLVILV GAGITRYFGF EGNVHIRENT ETNIVTTKGS 120
  121 YVNFAADVDG KEISASVPRG VENINKEGFD IALKLADADA RLKFIEYIPK ASYKFVDDPS 180
  181 GKPVIELVIS DETNREEVYL LDGEEALAGE ISFIFNAKPR EGQKYVLFEL KDGKFSVTSN 240
  241 QKISKFSMSD NAKIELDAGS VNEFAPMNLY SVNGINFAPQ FISASAARKL VTTQDSEFDA 300
  301 IIAQLSYKGE NKEMTLFYNL IEPARATIGG QNFIASWGPQ QIKLPFSLFL KDFELKRYPG 360
  361 SNSPMSYASD VVVKDSVSPS FDYRIYMNHV LDYDGYRFFQ SSYDRDERGT ILSVNKDPGK 420
  421 IPTYIGYFLL GLGFLLNVIN PGSRFRKLAN LIDNEAAKKV AACIAACLIV FGANEAKASD 480
  481 FLPQISPEHA QKLSRLLVQS PDGRIKPFDT LSKEVLNKIH RQDSIGSLNS NQAMLSIMVT 540
  541 PEFWRSEPII ALGFSKELKK DIGVDENAKY ASFNDFFKVG KDGGSEYKLT KFAEIANRKH 600
  601 PGSRGTFDKD VIKVDERLNV FYMIFIGEIF KIFPKQDDPS NSWYSPASAM MYFSPEEANL 660
  661 VVTMMKDYFT AVDEATRTQD WSKADASLDK IFEYQKKYGS AIMPSEKKVE IEILFNKFKI 720
  721 FDRLIPVYLL AGLVLLLFVF VKMLAPKVKI SGIVRVVYGI NILAFIAHTI GLGLRWYIAE 780
  781 HAPWSNAYES MVYIAWALGL SGIIFSKRSP IAIALTSILA GVTLFVAHLS WMDPQITTLV 840
  841 PVLQSYWLTI HVSVITASYG FLGLCALLGG FTLILIIMQN KRKPNPEITR NILEATRINE 900
  901 MAMILGLSLL TLGNFLGGVW ANESWGRYWG WDSKETWALV SILVYAAVLH MRFIPKLNNQ 960
  961 YAFAVASFFA YWAILMTYFG VNFYLAGMHS YAAGDPLPIP DFVWIGIGVM FAMTFLAFPK1020
 1021 RKICTKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle