YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134052595, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLDPHNDE QKETKPKKSV IREMLESVVI AVLLAAVIRL FILEPFFIPS GSMEPNLMIG  60
   61 DRIIVSKITY HLKEPQRGDI IVFKFPLDPS RNFVKRLIAK GGETVEIKNS VLYINNQPIE 120
  121 ENYLPKGLKF KDFGPEIVPE GHYFMMGDNR NNSDDSRVWG FLDKELIIGK AEVIYWPLNR 180
  181 ISLAK

Type	Start	End	Confidence
Cytoplasmic	1	23	0.89
Transmembrane Helix	24	43	0.89
Non-Cytoplasmic	44	185	0.97