YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134052652, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNTKKLML VLTLILAATV VFAGCGKKEE APKAEGEKGA GLSGSITIAG STSVQPLSEE  60
   61 LAKAFMTKNS GVTVNVQGGG SSAGVKAANE GAAQIGASSR DLKESEKGMG LTETKIALDG 120
  121 IAVVVNPKNQ VADLTMEQVA KIFSGEIKNW KEVGGKDAAI NVVTREEGSG TRGAFEEIVL 180
  181 GEAKMDSKAI TQPSTGSVKT TVAGDENAIG YISLGSLNEE VKGVKVDGVK PTVDNVKAGA 240
  241 FKISRPFLYL TKGEMNEVTK AYVDFVMSEE GQKIVGESHF ISIK

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	284	0.99