YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134052981, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRGQEPEK ENNERWLITY SDLITLLLIF FVVMYTLSKV DANKYHAIAS SLAKTMGGSQ  60
   61 SIMESGGPSM VPGASESKEL DTAMEQIEQQ KMEKIKKQIQ EYVDKNGLSG KVTVAIEERG 120
  121 VVVSFQDVVL FPLGVADLVP HSQGIVDKVG AILSQTPNYI RVEGHTDNLP IQTNKFPSNW 180
  181 ELSLARSASV VHRLINFSHI PPDRLSATGY GEYRPRRAND SDANRQQNRR VDIIVLRTKY 240
  241 QEVEPEAMQE INTLSPTSKK E

Type	Start	End	Confidence
Cytoplasmic	1	15	0.89
Transmembrane Helix	16	37	0.87
Non-Cytoplasmic	38	261	0.91