YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88925927, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRPLTIGLI QMDCVLGDVA ANVAKAIERI RQAAAMGAQI ICLPELCTTG YRPDLLEDKL  60
   61 WELTEPVPGP TTDVFSQLAK ELGIYIILPM NEKGAVPGMI HNSAVFIDKD GEVQGVFRKA 120
  121 HAYATERYYF TDGNHYPVFQ TEFGKVGVMI CYDMGFPEVA RILTLKGAEV IFAPSAWRQE 180
  181 DEDIWDINIA ARALENRLFV AAVNRVGREG DVVMHGKSKI ANTRGKTLAE AARFEEDILV 240
  241 ATVDLHELIA GRRETPYLKD RKPASYGLIT QIN

Type	Start	End	Confidence
Signal Peptide	1	17	0.52
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	273	0.99