YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88938627, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRLTKLRD RVANFAAGTV SKIDRGAWIQ PAVLVTVGFL LPAVAHAQVV SGGTSPTTII  60
   61 DNIATFILGP FGEGVAVLAV AAVGFMCWTG RMGFHAIGWL AAGLVLVFGS SYLVTTFVGG 120
  121 G

Type	Start	End	Confidence
Cytoplasmic	1	26	0.94
Transmembrane Helix	27	49	0.86
Non-Cytoplasmic	50	65	0.85
Transmembrane Helix	66	88	0.91
Cytoplasmic	89	95	0.81
Transmembrane Helix	96	116	0.94
Non-Cytoplasmic	117	121	0.71