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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88915019, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRYLFNFML NLKLRWKLLV VVLPLVIIPI FLVGGVIGYI STQQAYLGIT QTSKADLEHM  60
   61 SSFTIDLINS HRQQFQVYKK DKERSFNLEL ATLTNLSYNL VEAEQRQFRS GRIDLLTARQ 120
  121 EARKALKKVN VGETGYIYAM SSRGDLKVHI AREDENVYNE KDENGRYFIR EMCEKALKSK 180
  181 PGEVLYIVYP WRNAVLGDKY PRKKVVAYRY FKDWDWIIAT GGYLEETYED VAFEKRSFAE 240
  241 LKEKIKGKQV GKTGYIFCMD SKGNFTVHPD GEGKNFYGAK DSDGNHFIRE MCLNKSGWIR 300
  301 YPWKNAGEKA PRMKIVKYAY FQPWDWIVAV GSYEDEFYQE AKDIKRRILE SMVVLTFFVC 360
  361 MIAVALVFLA SKVLTDPINH MIAVIRKVKQ GRLSERMEVD TNDELGELAL AFNRMTQIIK 420
  421 NNKEMEANLA QQGKMASLGV LSSGVAHEIN NPLGVILGYA GYLEGKMSAD DPNFRFIHEI 480
  481 KRESKRCKKI VQDLLSYART PKPTLEETDI NELLEQIVDF AANHTDMHHV SVVKEFAKDL 540
  541 PRIMADGDQL RQVAINLILN AGAAMQSGGT LVVRTMLDDE GYIHLIFSDN GAGISAENLE 600
  601 KIFEPFFTTK TKGTGLGLAI TRQIIDQHQG KIAIESEPGK GTTVTVKLPV EREEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle