YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|146397061, gi...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRLKQDIK AVFDRDPAAR SALEVFFCYP GLHAIWFHRI SHWLWTHELF FLGRFCSHMG  60
   61 RFFTGIEIHP GATIGKGFFI DHGMGVVIGE TAEIGDNVTL YHGVTLGGVS WEKTKRHPTL 120
  121 GDNVVVGSGA KVLGPFTVGR DSKIGSNSVV VKEVPPNSTV VGIPGRVVMA TEKPTEKMDL 180
  181 QHGRLPDPEA KAISCLFDQI RELERKLSTL TTEYEQLKKR LDEGK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.55
Transmembrane Helix	21	37	0.57
Non-Cytoplasmic	38	225	0.71