YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148266090, gi...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKKAEKE PNLERWLVSY ADFITLLFAV FVTLYAMSQT DKKKAEEVVE SLRESFGYSK  60
   61 SSPVTKPKII DSGNINIIPN MRQQTLPPKQ AQYGKTRSHA EEKDFKAIKA AIEAYLLKND 120
  121 AQNKVSVEIT RRGLVVSLKE VGFFDSGSAT VQQNSYGLLA HVAESVSNYT NPIRVEGHTD 180
  181 NVPISSHTFP SNWELSTARA TNLVQYLIRY YEFQPDKISA TGFGEHRPIA DNSTAEGRGK 240
  241 NRRVDIVLLS TESERGEP

Type	Start	End	Confidence
Cytoplasmic	1	15	0.88
Transmembrane Helix	16	37	0.86
Non-Cytoplasmic	38	258	0.98