YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88937956, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKKISKIL VFAALAVSVP VAALAEVSLL NVSYDPTREL YQDFNGAFAQ YWKKKSGENI  60
   61 TVKQSHGGSG KQARAVIDGL EADVVTLALA YDIDEIHDKA KLIPANWQKR LPNNSSPYTS 120
  121 TIVFLVRKGN PKKIRDWNDL VKPGISVITP NPKTSGGARW NYLAAWGYAL KQKGGNEAKA 180
  181 KEFVGKLFKN VPVLDSGARG STTTFVQRGI GDVLLAWENE AFLAVNELGK DKFEIVVPSL 240
  241 SILAEPPVAV VDKVVDKKGT RKVAEEYLKY LYTPEGQEIA AKNYYRPRDK KVAAKYAKNF 300
  301 PKVKLFTIDE LFGGWRAAQK KHFTDGGLFD QIYKPSK

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	337	0.99