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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88915578, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRSLIKKK QDITMSIITN NHLRPGLQEQ IAATKSGCTN CGECVRECAF LKKYGTPKSI  60
   61 ADSFDAIDPK SLARSFECSL CGLCSVVCPE QLDLDGLFLE MRREAVDRGF GDYPEHSPLL 120
  121 TYERLGTSRR FSLYRLPQGC TTIFFPGCSL SGTRPDGVNR VFAELQKTDP TVGIVFDCCL 180
  181 KPSHSLGREQ YTGAMFEEMN NWLVQQGVKE VLVACPNCQV MFTSLGQGLK VRTVWESLAE 240
  241 SGLQPEGVSG TVTVHDPCVI RDAQPVHQAV RTLLNRQGLM VEEMPHSGRT TVCCGQGGAV 300
  301 NLLNPQLAAS WGELRKREAA GRRIITYCAG CVQALGGHTP TNHLVDILFA PNQTLAGKKK 360
  361 GAGAPFTYLN RLRLKRAFKR KEGYAVTRER TFVPEQGQPK KRSWKPLIFL VLLVAAVAGV 420
  421 HLSGAAQYLQ QEKLQALIAS YGVLAPAIYI LLYALAPVLF LPGLPITIVG GILFGPVWGV 480
  481 VYTITGATIG ASLAFLVARY VARDWVAAKL TGPTWEKLDS EVAQHGWKVV AFTRLIPAFP 540
  541 FNLLNYAFGL TKVPFVHYMV ATFVFMLPAC IAFIVFSSSL LGLIKGKVSP TALLGIGLIV 600
  601 LVSLIPVVYR RFKGRQAAEA EAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle