YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88936780, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRARIYLLF FVPFSLMCSA MAVCGTFFDA TGAFAHKCAR FWSRWGLFFA GIKVRVDGVE  60
   61 KIPTDGPVIY MGNHQGNFDI LALSLAIPRR FSWIAKEELF RVPLFGSAMH RAGYIPLDRS 120
  121 DGRRALKSMN AAAARIRSGS SVVVFPEGTR TADGNLLPFK RGGFLLAVKA GVPIVPFTIN 180
  181 GSMRINPRNR LELYPGILSI TFAEPVTTAT YNGKEHPELL EQVRNAIAAG LE

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	232	0.96