YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|146396284, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHEAINWLLI TMKAMGYPGI FLLMAMESSV IPIPSELVMP PAGYLAQRGE MNAFIAILCG  60
   61 TMGSLIGAYA NYFAAHYLGR PLLLKYGKYV WITEEKFAKV EGFFLRHGEI STFIGRLLPV 120
  121 VRHLISLPAG LAGMNHVKFA LYTLLGAGIW VSVLTWIGYF IGQNQELIMR YSHKALIGVV 180
  181 VFSALLIAVY VKLQRNKSTK HQKTLPDRIV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.76
Transmembrane Helix	14	33	0.87
Non-Cytoplasmic	34	52	0.76
Transmembrane Helix	53	75	0.92
Cytoplasmic	76	138	0.82
Transmembrane Helix	139	161	0.91
Non-Cytoplasmic	162	170	0.76
Transmembrane Helix	171	193	0.88
Cytoplasmic	194	210	0.82