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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148263921, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKKI LIIGAGPIVI GQACEFDYSG TQACKALKEE GFQVVLLNSN PATIMTDPDF  60
   61 ADRTYIEPVT PEILAMIIEK ERPDAVLPTL GGQTALNTAV AVAESGVLEK YGVELIGAKL 120
  121 PAIKMAEDRT LFKEAMQRIN LTVPRSGLAH NHAEAMEIIK EIGFPAIIRP SFTLGGTGGG 180
  181 IAYNMEEYEK MSVAGIEASP TSEILIEESV IGWKEYELEV MRDTADNVVI ICSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRDASLK IIREIGVDTG GSNIQFGINP RDGRLVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEITNDIT RETPACFEPT IDYVVTKVPR 360
  361 FTFEKFPAAD ATLTTQMKSV GEVMAIGRTF KESLQKAIRS LEIGSSGFES RLFDSKAETR 420
  421 RALTGKEQQL LMEKLRTPNW ERLWYLGDAF RSGMTVEEIF AVTAFDPWFL HNIKQIIDKE 480
  481 DELKQVNVEE EANDNLKEVI REAKQYGFSD KHLGNLWGKT EDEVRQLRLS LGIKPVFKRV 540
  541 DTCAAEFVAY TPYLYSTYEE ECEAEPTDRK KIMILGGGPN RIGQGIEFDY CCVHGVFALA 600
  601 EDGYETIMVN CNPETVSTDY DTSDRLYFEP LTYEDVLNIV ELEKPEGVIV QFGGQTPLKL 660
  661 AVSLEKAGVP IIGTSPDAID RAEDRERFQE MLHKLGLRQP ENGTARSFEE AEKVADRIGY 720
  721 PVVVRPSYVL GGRAMEIVYD VDNLRRYMHT AVQASPEHPI LIDKFLDEAI EIDVDALCDG 780
  781 TEAVIGGIME HIEEAGIHSG DSACSLPPYS ISREIADEIR RQTKMMALEL NVRGLMNVQY 840
  841 AIKDDVIYIL EVNPRASRTA PFVSKATGRP LAKLAARIMS GKTLRELGIT EEIEPTHISV 900
  901 KEAVFPFVKF PGVDTILGPE MKSTGEVMGI DDNFAKAFAK AQLGAGVKLP TSGKVFISVR 960
  961 DADKKHIVSA AKKLYDNGFE LVATRGTAAY LQEKGIPVLV VNKVLEGRPH IVDSIKNNEI1020
 1021 CMVINTTQGA QAVADSFSIR RNALVSNIAY YTTASGARAV VDGIIAMRQE ELSVKPIQDY1080
 1081 LK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle