YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PIMT3_GEOUR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVIILAFAL LLTTASVLSS ATDPYLQKRQ EMVRDDIRGR GIKDGRVLDA MAKIPRHLFV  60
   61 GERLRRQAYA DTPLPIGEGQ TISQPYVVAL MTEALRLKPG DRVLEIGTGS GYQAAVLAEM 120
  121 VKDVYSIEIR KDLAETADKR LKELGYKNVA VKYGDGYLGW PEYAPFDAVI ITASVNHIPP 180
  181 PLLKQLKEGG RLILPLGSTL FYQTLTLVTK KKGGDLAVEQ MGAVAFVPMT GEAQKR

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	236	0.99