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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88934891, gi|...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQVIYVCLH VGQTLSVQRV RHGRREKLDL MVKLTAIVLI CLATTCLFAD TKADPRAVRS  60
   61 ANIAEIRKLA IEGHVDAQFY TGFMYEKGQG VLQDYAEAVK WYLKAAEQGH AGAQINVGIM 120
  121 YFKGQGVLPD YAEAAKWYRK AALQGNANAQ FNLGLMCNKG QGVSRDYVEA AKWYLKAAEQ 180
  181 GNSGAQFNLG LMYYKGDGVA RNFAEAFTWY RKAAEQGNAG AQFSLGLMYY KGQGVPKNFA 240
  241 EAAAWYRKSA EQGHVGAQFN LGYMYEMEQG AVGGNAEAAK WYRKAAEQGH AGAQSNLGYI 300
  301 YDIGEGVPQD HAEAAKWYRK AAEQGNAAAQ LNLGIMYDNG HGISQDNAEA VKWYRKAAEQ 360
  361 GDMTAQYNMG VKYANGIGVP RNNAEAVEWY RKAADQGHEI SQVNLGHLYE NSDGVPQDYA 420
  421 QALKWYGKAA EQENSDAQFS LGLMYAKGQG TPQNYAEAAK WYRRAADLGN EIAYYNLAIL 480
  481 YYKGLGVDRD YAETVRLLKE VADQEDANVH FSLGYMYYKG QGVIEDHAEA LKWFRKAGDE 540
  541 GLKEAMNYVN SIEKKVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle