YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88934766, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHCTTVILF VSILVASVIS GRADFDAGLR AYNDGDYATA MREYRIDGSA RSLFNLGLMY  60
   61 AEGKGVNKRN SREAMKWYRK AAEQGLAKAQ FALGLMYALG EDVAADKKEA ARWYRKAAEQ 120
  121 GHAAAQYNLA QMYARGDGVK KDETEADKWY RKAAEQGNAA AQLNLAQLYE KGAGVVQDKK 180
  181 EAARWYLKAA EQGNVRAQFS IAMMYDKGDG VEQNKKEAAR WFRRAAEQNH AKAQFKIGFL 240
  241 YDKGDGVLQD KKEAVKWYRK AAERGVSEAR FNLGLMYYAG SGVPQDKKAA ARWFRKAADQ 300
  301 GDVDAQFNLG HMYDQGDGIK QDRKEAVKWY RKAAEQGFDQ AQFNLGLMYF HGYGVKQNRK 360
  361 EAFKWFVKAA EQGSDEAVKT LEVLGRGMPL ARP

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	393	0.99