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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88914203, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNRNNPQS RMPVSGGPMG GGMHMGGGPM GGMRMAHSGE KARNFKDTMT SLLKYLTPYR  60
   61 FTLIIALVLA IFGTVFTIIG PKLLGNATTK LFEGLVSKVM NAPGAGIDFT YIGNIVLILV 120
  121 GLYAVSAICS YIMGYIMTGV SIKVTYDLRK QIAEKINRLP MKFFDNKTYG EVLSHVTNDV 180
  181 DLISNTLTQS MSQMVTSVVT ILGVLVMMFT INWIMALASL IIVPVSIGLI SLIVGRSQKY 240
  241 FRKQQDYLGH INGHVEEMYS AHNVMKAFNG EEKSITKFEG LNEELYGASW KSQFLSSIMM 300
  301 PMMNFIGNLS YVVVCILGGF LAIQKTIQVG DILAFVQYVR SFTQPLAQTA NIVNILQSTA 360
  361 AAAERIFEFL GEGEEVPEPA NPVSLKDISG AVSFKDVSFG YSPTKVIIKN FNADIKPGQR 420
  421 VAIVGPTGAG KTTMVKLLMR FYDVNSGAIL VDGINIQDIK RQEYRSAFGM VLQDTWLFNG 480
  481 SIMDNIRFGK LDATDDEVYT AAKTAYVDHF IHTLPNGYEM VMNEESSNIS QGQKQLLTIA 540
  541 RAVLANPKIL ILDEATSSVD TRTEMLIQQA MENLMKGRTA FIIAHRLSTI RNADIILVMK 600
  601 DGAIVEQGNH KELLEANGFY ASLYNSQFES GLIENN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle