YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88860093, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLLPVALV QHSNSTDLAH NFAKTQDGIR KAAAQGAKLV VLQELHRSLY FCQTEDTERF  60
   61 DLAETIPGPT SDSLGLLAKE LNVVIVSSIF EKRATGLYHN TAVVLDSDGT IAGKYRKMHI 120
  121 PDDPGFYEKF YFTPGDLGFT PIQTSIGKLG VLVCWDQWFP EAARLMAMAG AEILIYPTAI 180
  181 GWDTTDDIDE QTRQCDAWVI SQRAHAVANG VPVISCNRVG HESDPSGHSE GILFWGNSFI 240
  241 AGPQGEILAH ASAKDDEILT AILDLKRSED TRRIWPYLRD RRIDHYQDLL KIYRD

Type	Start	End	Confidence
Signal Peptide	1	15	0.76
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	295	0.99