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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88860072, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVMSTLALS VLAASLMGCN KQPSQAEAPV VTVPIATGAP GVTPYWAYSG KTGIGTSFEQ  60
   61 YLNGQYSDNA PTKAVSKVWF SIAQGLITET MFGLIHQAQI KDMQFVVKGA DFIATERDDT 120
  121 TDTIEYLSTD EQGRPQSLAY KITTLDKQGR FKIEKHVFTD PSDQSLFVRV VIESFSGPLT 180
  181 AYVSANPYVN NNGVGDSAAV ENGALVAWEG DNVITLKAAS GFKHAMVGFT GISDGLTQLQ 240
  241 ETDALNNLYQ QTGSTPGNVS LFAELGSVAA KGAAPTQFDL VLSFGKSKES SLKSANATLK 300
  301 RGYDATLSEY NGEGDFIGWQ DYLASLKPLN NMTNQTTDNG KLLYTSALVL KAQEDKTHAG 360
  361 AVIASLSNPW GDTVKAIEGS TGYKAVWVRD FYQVAMAFLA LGDNETAKIA FEYLEKVQVS 420
  421 ANTPGNGGDT GWFLQKTHVD GELEWVGVQL DQTAMPIMLA WKLWQAQQLS DSELINWYQK 480
  481 MLKPAADFLV KGGRAKILWN DTHITPPMTQ QERWEEQAGH SPSTTAAVIA GLITAADIAK 540
  541 AAGDVQNSAL YLATARGYSA HIEAQMVTTQ GTLPGSDGHY YIRINQNEDA NSDSKLGDNN 600
  601 GRTGLDKKQI LDGGFLELVR YGVRSADDSH VVASLNEYDD ETLPENLRVK YSFKFAGQEG 660
  661 SFAGWRRYGN DGYGEDETTG SNYAATGGNT PGQRGRVWPF FTGERGHYEL ARAKQVAGEK 720
  721 ALSDETMSQL KLNYVKAMEL FANEGMMLPE QVWDNVGVNP QGYTSGEGTN SATPLAWTHA 780
  781 EYVKLIKSLT DQAVWDYYPI VAEQLKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle