YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88819239, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSNQTKVSK KIIGLTGGIG SGKSAVANMF AALGIELVDA DIVAREVVAI GSPALAAIKQ  60
   61 YFSEDFLNQD GSLNRSKLRE RVFSQADDKL WLNNLLHPLI RSEILAQLHQ ASSPYVLLVA 120
  121 PLLFENKLNE LCDHSVLVDV PVATQLQRTS TRDNCTVELV QNIIAAQMPR AQKQALADDT 180
  181 IDNSLALDHT KKQVTALHQK LLALT

Type	Start	End	Confidence
Signal Peptide	1	27	0.47
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	205	0.98