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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPI7_CANAL
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSLNSRWV VQVSLTIINI IGFLVFLRGF FPSKVVLPGF NSFQDSTKSP FSDQYGNPQF  60
   61 NKFILMVVDA MRSDFCFSDR SNFSFLHQLI NQGRALPFTA FSNPPTVTLP RLKGITTGGT 120
  121 PNFLDAILNV ADDQDDSQGL HNQDSWVHQF RHSNNKTINF FGDDTWLKLF QDQFTEFEGT 180
  181 NSFFVSDFTE VDNNVTRHLD DQLSSNKWDG LILHYLGLDH IGHKGGPESP YMKPKQIEMD 240
  241 KILQRLYTYV TKNDDTLIVL MGDHGMNEIG NHGGSSPGET SAALSFISPK FNHKGESPLP 300
  301 YNSDYSYHHK ISQIDLVPTL AALLNFPIPK NSLGVIAKEI LEIWPENQRI KILLENCAQI 360
  361 MNLYEAKYGP SGEVWTQWEN LQAKQHPIAD YYEFLQDIQS EMASSATNYG YKDIYAGALI 420
  421 LVITVLAVIV VFNRYFFTVS NMNISSVMFY ELFVVLYSLH FHGSSLIEEE HQIWYFFTTA 480
  481 TLLFLAITFF DTFKSLQNFI SFGVLFACIR FMRSWNNSGQ KYSSQYNIAY YLSHSNPNLM 540
  541 WGLIILTYFV LTLCIYIQGS LVPTFAFSFG KRLPDVKDPG GLISFIVVFV ATSVSFSFKL 600
  601 LQYYIDGNTI PKWLNRFLLW IIESHHIDLS SATLEDNELK FQLQSVSIQL SKFTTIILLL 660
  661 LVISRVIIGK IRKIRYGTIT DITNIMTIYL IHQTRHENIP IFLALMFAKF ALSKLIYRKT 720
  721 NRIDQYILTV TMTVLCLQNL TFFCMGNTNS LATVDLSNAY NGVKAYNVFL VGLLTFVSNF 780
  781 AGPIFWSLSG LQLLYEPSLL NFNGPATTDL LHYTGLKKSI LLVKSLISLF FYTVSAVNLV 840
  841 GSCINLRFHL FIWTVFSPKL LFFGSWILFV NVLIDLYFGN NSIVVLKTNI LL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle