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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88813487, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVRLSKAA GNADTGLACL CLIARYHQLP ADEQQLRREF VPPGKAFDAL TLVRAARSLG  60
   61 LRARQLHSRV QRLEKTPLPA IAERHDGRFV VLARLGDGQV LLHDPREGRT RALPIDEFAQ 120
  121 EWSGWLILVT RRTLAEELRR KFDIAWFIPA FARYRRIFGE VLLASFFIQL FALVTPLFFQ 180
  181 VIVDKVLVHK GLTTLDVLAV GFLIIAVFDV LLGGLRTYLF SHTTNRVDVE LGARLYRHLL 240
  241 ALPISYFEAR RVGDSVARVR ELETIRSFIT GSALTLVIDL FFTLVFLAVM YFYSATLLCV 300
  301 VVASIPLYVL LSMLVTPMLR TRLNEKFRRG AENQAFLVES VSGVETIKAM AVEPQMRARW 360
  361 EEQLAGYVKA SFRATNLSNI ANQGASFINK LTTLLILWLG ARLVIDADLT VGQLVAFNML 420
  421 AGRVSAPILR LVQLWQDFQQ AGISVARLGD ILNAPTEPGY NPNRAALPAV KGDVRLEHVS 480
  481 FRYRPDGSET LKDLTLHAAP GEVIGLVGRS GSGKSTLTKL VQRLHVPESG RVLVDGVDLR 540
  541 LVDTAWLRRN IGVVLQESRL FNRTVRENIA LAEPGLSMEC VVAAAQLAGA HEFILELPEG 600
  601 YDTLVGEHGA NLSGGQRQRI AIARALIMDP KILIFDEATS ALDYESERII QQNLRRIVRG 660
  661 RTVFIIAHRL SAVRDVDRII VLEKGRIVQA GRHEELLRRH GPYARLHALQ DKTNGAEPLA 720
  721 DSGYAASRLD GFERAACRCP KPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle