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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88812999, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLTAVALL LGAQGALHAA PLALSTKPLF LKTGVAPNLI ITLDDSGSMR RDYMPDNRSG  60
   61 NRNERFYSSD YNGVAYNPEV AYDPPLHADG TPFSTTFHNA YTSPFTNTCS DGRRGCGPAK 120
  121 DLSVDYITRD LWGSNQTWPA FYAKFTSSNL LSLVPLTVLC DILTDLDQNV CYNRVTVSAT 180
  181 SGPSGSDERQ NFANWYSFYR DRNLTTITGA SRAFYPLGND IRVGWQRLNT STTIKPVRFF 240
  241 TSTHRTAFYN WLFDLPHSGG TPLRRALQRA GVYFKTNQPY YNNAVDSGDG SASCRQNYQV 300
  301 LMTDGLWNGG LSNGPGNYDN SEQTLPDGTS YNPQAPFQDD NSNVLADLAF KYWAEDLSTL 360
  361 ANDVPPYMLQ QGASASANYW NAQNDPANWQ HLVNFTVGLG LGASLTDPVW GGSTFTGDYP 420
  421 NLADGSKNWP AITSNTPSTV SDLWHAAINS RGQFFSADDP KALAAAFKTI LNRVADRTSS 480
  481 GTSVAIESGA ITHSDNVYIA RFNSRDWTGQ VVAHALSHDP VTLGDIGAAV WDAACALTGG 540
  541 ACTTDGNTYT GRTAANRQIV TYNPATGTGV PFQWADLNSS QTTFLNRASD GTVDSEGEAR 600
  601 LHYLRGDRSQ EQSNGGGFRD RKGLLGDVVD ATPIYVGPPD RFYPDDWDDA RTTGNDNTAE 660
  661 DQVTGTYADF KAAHDSRAGV VYVGANDGML HAFAAATGAE LFAYVPSAVY DHLSDLTDPA 720
  721 YGHRFYVDAT PTEGDAFFGG AWHTILVGGL RAGGQGVYAL DITTVPGASA GEASVAAKVL 780
  781 WEFTDADDAD LGATYGQPQI VRLHNGHWAA VFGNGYNNTD NDGKASSTGN AVLFIRDLES 840
  841 GTVIKLDTHR GTADDPTGNA RPNGLATVTS ADVDGDSIVD YLYAGDLFGN LWKFDVKAGN 900
  901 TSNWKIAYGS SSNPTPLFTA VDANGTHEPI TTAPSIRRHP TGEGFLLMFG TGKYLENQDS 960
  961 ALSTKMQSAY GIWDRDGSSL KAFTRSNLLE QTIEQATTVN GTDFRIMSDH SLTWADSDPT1020
 1021 TLPSSSSDGY LGWYMDLLAG EMQVTDSLVR GNRLIFTTLI PNDDPCSLGG DSWLMVLDYR1080
 1081 DGGRFNLPVF DTDNNGVFAL ADLVEVDVDG DGNKEKISVG GQKSKSGILQ TPTLGSMADA1140
 1141 DRAYLGGSDG KGTDCAGQDC TDIGRDPATR NRQSWLQLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle