YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88811137, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRITTRGTGA LVMACSLWVT ACTTSPTGRS QLKLFPEQQV ESMGTQAYKE MKQKQPIADD  60
   61 PRVTSYVRCV ADAITRVLPG EHGKTHWEVT VFRSDQINAF ALPGGKIGVY SGLLKVAQTP 120
  121 GQLATVIGHE VGHVLAGHAN ERLSTNAATQ TGLDLLSIFV GSGGFIEQQG LALLGLGAQV 180
  181 GIILPFSRTQ ESEADEIGAE LMAQAGFDPR QGVELWQNMS KAGGDQPPQF LSTHPSPSNR 240
  241 IEDLRDHMPR AMRLYERAQF DGRNPECTRP ATK

Type	Start	End	Confidence
Signal Peptide	1	30	0.89
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	273	0.99