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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157107458, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKCFFILIC ITALTRAIKL KSEQTTKEWW ERAGFYQVYP RSFKDSDGDG IGDLNGITEK  60
   61 LSYLKDIGMR GFWLSPMYKS PMADFGYDIS DFRDIQPEYG TMDDFKKQIA EAKRLGLKLI 120
  121 LDFVPNHSSD EHEWFKKSVN REQGYEDYYV WRDGKRNPNN ASEMLPPNNW LSGFRGSAWQ 180
  181 WNEQRQQFYY HLFTAQQPDL NFRNPAVVQE MKDILLFWLE LGVDGFRVDS VGCMYEIPAD 240
  241 ENGNFPDEPL SGTTNDPEDF AYLEHIYTID RLENVGMVYE WRQLLDDYQK QHGGDRRIMM 300
  301 TESWSSLDII KPYFSDIKGR EGAQMPFNFR MITELNSTST AYDFKNVIDS WMAIVDDDHT 360
  361 ANWVLGNHDR SRVATRMGEQ RIDGLTMIQL TLPGVSVTYQ GDEIGMTDVD ISWEETVDPA 420
  421 GCNEGKDNYV SKSRDPVRTP FQWDDTNLAG FTNGTRTWLP VGPNYRTVNV RVQSSDTMSH 480
  481 LSIFKALMSL REKDTFLYGD WRTVALNDQV FAVIRDLKMS DSYMTLVNFG SSVQTIDGSS 540
  541 LLSSIPKTLY YAIVSGSSSH KAGDTVPTKT IVLEAYESFV LEVRRSEDNK MRAAVCERWL 600
  601 Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle