YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88777378, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAVAGTGY VGLSNAMLLA QNHEVVAVDI VPEKVEQLNQ GQSPIEDTEI EDFLANKTLN  60
   61 FSATLDAEAA YQGAEFVIIA TPTDYDPDTN YFNTGSVEAV IKQVMAVNPE AVMVIKSTIP 120
  121 VGYTAKLKAE MGTDNLIFSP EFLREGKALY DNLYPSRIIV GERSERAERF AALLQEGAVK 180
  181 KDVPTLFVDA TEAEAIKLFA NTYLAMRVAY FNELDTYAET HDLNTRQIIE GVGLDPRIGN 240
  241 HYNNPSFGYG GYCLPKDTKQ LLANFEEVPN NLIKAIVDAN TTRKDFIADS IIKRGPKRVG 300
  301 IYRLVMKSGS DNFRASAIQG IMKRLKAKGI EVVVYEPVLT EHEFFRSLVI NDLEKFKQVS 360
  361 DVIVANRPSD ELADVMDKVY TRDLFGSD

Type	Start	End	Confidence
Signal Peptide	1	20	0.57
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	388	0.99