YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88796600, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYEVLLVAY LIVALLLIGF VLIQQGKGAD MGASFGSGGS NTVFGSSGSG NFMTRTTAIL  60
   61 AGLFFFISLS LGAMTANRES AEDEWDNLEI PAAVEQQVER PADQDVPVIE GAAQSDVPVV 120
  121 DGAAQGDVPA VEDDATDVPA SDDTEGSN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.84
Transmembrane Helix	7	26	0.94
Non-Cytoplasmic	27	51	0.87
Transmembrane Helix	52	75	0.83
Cytoplasmic	76	148	0.94