YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88772097, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLMLTDQR WQKLLQVMKS TGRIYNKPEH RMTFEGILYR LRTGIPWRDL PTEFGGWSTI  60
   61 YRRFNLWSKK GLLNNLFNEL AKLADYDWVF ADGSIVKAHQ HSTGAATSDN ECIGKSRGGN 120
  121 STKIHLAVDS GGLPIYFELS EGQRNDIARA QSLVDHLQEV NIFVGDKGYD SDALREYIEA 180
  181 RGGISVIPKR NYGQDIDKES VDWCLYKYRH LVENAFARIK HYRSVSTRYE KLARNYASMV 240
  241 SLAFSMMWLP MYC

Type	Start	End	Confidence
Cytoplasmic	1	231	0.58
Transmembrane Helix	232	251	0.59
Non-Cytoplasmic	252	253	0.82