YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157118334, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSQKVTKK WEIFAGRNKF YCDGYLMTAP NSGVFYFTVV LITGTSGLFF AFDCPFLAER  60
   61 ITPAIPIIGG ILFVFTMSSL FRTSFSDPGI IPRASQDEAA YIEKQIEVPN SLNSPTYRPP 120
  121 PRTKEVFVKG QTVKLKYCFT CKIFRPPRAS HCSLCDNCVD RFDHHCPWVG NCVGKRNYRF 180
  181 FYMFIVSLAF LAVFIFSCTT THIVLLFKDE DQFFDIVKKT PFSVIIAVIC FCSVWSVIGL 240
  241 AGFHTYLTTS DQTTNEDIKG SFTSKGGQQA INPYSQGNIC LNCFHILCGP ITPSLIDRRG 300
  301 IVTDEYRTQM QAPDKYNSAP VPPLVVMQPG LDPQNKPYSL ESETQNSSAG VFRQRSYDNL 360
  361 QNEKSNSIAH LVENEAPLSN TGNISAIEDT TATTLVMDDD TIVEMEPPKI VNLSGSYNNL 420
  421 FRESVSGGKL TAADSDKMQN ADEIINASDL MMVSSVSGHE NVYSNIPSGS GTIGNGAIGS 480
  481 PKRTSLNNAG GRITDNGKSN DPNLHVYSNI GNGSHTSNGN LVGQRHSASS GSNFHHLPNS 540
  541 NSVNNNFSPV VDDQSLLNSS FITNDLDLDD PVMTSAFASK TTASSGGSLI DSGPSAMVTT 600
  601 PSSHLPLPPL KSSQPITAIE MKNVIKTLDP SVIIQAAGGG TNGNNGTIAN GSNHSSNSNT 660
  661 NINSNSINNN TNSSSNGTSS GFITSSNRLR LLQESTMIDT ALDLDSLDGS IGNNSQSCLV 720
  721 KTAIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle